DAI Hongliang. Automatic Feature Selection and Classification of Microarray Data Based on ITAFSVM[J]. Acta Scientiarum Naturalium Universitatis SunYatseni, 2010,49(2):37-42.
DAI Hongliang. Automatic Feature Selection and Classification of Microarray Data Based on ITAFSVM[J]. Acta Scientiarum Naturalium Universitatis SunYatseni, 2010,49(2):37-42.DOI:
SVM has been successfully employed to solve the analysis of gene expression data. However
there are still open issues which need to be addressed: ① SVM does not offer the mechanism of automatic internal relevant feature selection; ② There are no simple and effective means to confirm the appropriate parameters setting of SVM. In this study
total marginbased adaptive fuzzy support vector machine (TAFSVM) which has good quality is proposed. In addition
it is proposed an evolutionary approach to design a TAFSVMbased classifier (named ITAFSVM) by simultaneous optimization of automatic feature selection and parameters tuning using an intelligent genetic algorithm (IGA)
combined with 10fold crossvalidation regarded as an estimator of generalization ability. Subsequently
the model of ITAFSVM is used to analyze four gene expression datasets. Comparisons with evolutionary support vector machine and a combination of roughbased feature selection and RBF neural network are reported. The experimental results indicate that the proposed ITAFSVM model can not only accomplish automatic feature selection
but also achieve higher classification accuracy
stable and faster speed.
关键词
全间隔自适应模糊支持向量机智能遗传算法基因表达谱分类微阵列
Keywords
total marginbased adaptive fuzzy support vector machineintelligent genetic algorithmsgene expressionclassificationmicroarray